aroma.light

Light-weight methods for normalization and visualization of microarray data using only basic R data types

Bioconductor version: 2.8

Methods for microarray analysis that take basic data types such as matrices and lists of vectors. These methods can be used standalone, be utilized in other packages, or be wrapped up in higher-level classes.

Author: Henrik Bengtsson <henrikb at braju.com>

Maintainer: Henrik Bengtsson <henrikb at braju.com>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("aroma.light")

To cite this package in a publication, start R and enter:

    citation("aroma.light")

Documentation

PDF   Reference Manual

Details

biocViews Infrastructure, Microarray, OneChannel, TwoChannel, MultiChannel, Visualization, Preprocessing
Depends R.methodsS3 (>= 1.2.1)
Imports
Suggests R.oo (>= 1.8.0), R.utils (>= 1.7.4), princurve (>= 1.1-10)
System Requirements
License LGPL (>= 2.1)
URL http://www.aroma-project.org/
Depends On Me
Imports Me
Suggests Me pcaMethods
Version 1.20.0
Since Bioconductor 1.9 (R-2.4)

Package Downloads

Package Source aroma.light_1.20.0.tar.gz
Windows Binary aroma.light_1.20.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary aroma.light_1.20.0.tgz
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