TargetSearch

A package for the analysis of GC-MS metabolite profiling data.

Bioconductor version: 2.8

This packages provides a targeted pre-processing method for GC-MS data.

Author: Alvaro Cuadros-Inostroza <inostroza at mpimp-golm.mpg.de>, Jan Lisec <lisec at mpimp-golm.mpg.de>, Henning Redestig <henning.red at googlemail.com>, Matt Hannah <matthew.hannah at bayercropscience.com>

Maintainer: Alvaro Cuadros-Inostroza <inostroza at mpimp-golm.mpg.de>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("TargetSearch")

To cite this package in a publication, start R and enter:

    citation("TargetSearch")

Documentation

PDF R Script The TargetSearch Package
PDF   Reference Manual

Details

biocViews MassSpectrometry, Preprocessing
Depends R (>= 2.7.0), xcms, methods
Imports graphics, grDevices, methods, stats, tcltk, utils
Suggests TargetSearchData
System Requirements
License GPL (>= 2)
URL
Depends On Me TargetSearchData
Imports Me
Suggests Me
Version 1.8.2
Since Bioconductor 2.4 (R-2.9)

Package Downloads

Package Source TargetSearch_1.8.2.tar.gz
Windows Binary TargetSearch_1.8.2.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary TargetSearch_1.8.2.tgz
Package Downloads Report Download Stats

Workflows »

Common Bioconductor workflows include:

 

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Fred Hutchinson Cancer Research Center