SQUADD

Add-on of the SQUAD Software

Bioconductor version: 2.8

This package SQUADD is a SQUAD add-on. It permits to generate SQUAD simulation matrix, prediction Heat-Map and Correlation Circle from PCA analysis.

Author: Martial Sankar, supervised by Christian Hardtke and Ioannis Xenarios

Maintainer: Martial Sankar <martial.sankar at unil.ch>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("SQUADD")

To cite this package in a publication, start R and enter:

    citation("SQUADD")

Documentation

PDF R Script SQUADD package
PDF R Script SQUADD package
PDF   Reference Manual

Details

biocViews GraphsAndNetworks, DataRepresentation
Depends R (>= 2.11.0)
Imports graphics, grDevices, methods, RColorBrewer, stats, utils
Suggests
System Requirements
License GPL (>=2)
URL http://www.unil.ch/dbmv/page21142_en.html
Depends On Me
Imports Me
Suggests Me
Version 1.2.0
Since Bioconductor 2.7 (R-2.12)

Package Downloads

Package Source SQUADD_1.2.0.tar.gz
Windows Binary SQUADD_1.2.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary SQUADD_1.2.0.tgz
Package Downloads Report Download Stats

Workflows »

Common Bioconductor workflows include:

 

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Fred Hutchinson Cancer Research Center