RMAPPER

R interface to the MAPPER database of transcription factor binding sites

Bioconductor version: 2.8

The RMAPPER package allows you to retrieve a set of predicted transcription factor binding sites from the MAPPER database (http://genome.ufl.edu/mapper/) through a simple HTTP request.

Author: VJ Carey <stvjc at channing.harvard.edu>

Maintainer: Heike Sichtig <hsichtig at ufl.edu>, Alberto Riva <ariva at ufl.edu>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("RMAPPER")

To cite this package in a publication, start R and enter:

    citation("RMAPPER")

Documentation

PDF R Script Interface to MAPPER TFBS database
PDF   Reference Manual

Details

biocViews Annotation, Genetics
Depends methods
Imports
Suggests RCurl
System Requirements
License Artistic 2.0
URL
Depends On Me
Imports Me
Suggests Me
Version 1.2.0
Since Bioconductor 1.8 (R-2.3)

Package Downloads

Package Source RMAPPER_1.2.0.tar.gz
Windows Binary RMAPPER_1.2.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary RMAPPER_1.2.0.tgz
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