NTW

Predict gene network using an Ordinary Differential Equation (ODE) based method

Bioconductor version: 2.8

This package predicts the gene-gene interaction network and identifies the direct transcriptional targets of the perturbation using an ODE (Ordinary Differential Equation) based method.

Author: Wei Xiao, Yin Jin, Darong Lai, Xinyi Yang, Yuanhua Liu, Christine Nardini

Maintainer: Yuanhua Liu <liuyuanhua at picb.ac.cn>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("NTW")

To cite this package in a publication, start R and enter:

    citation("NTW")

Documentation

PDF R Script NTW vignette
PDF   Reference Manual

Details

biocViews Preprocessing
Depends R (>= 2.3.0)
Imports mvtnorm, stats, utils
Suggests
System Requirements
License GPL-2
URL
Depends On Me
Imports Me
Suggests Me
Version 1.2.0
Since Bioconductor 2.7 (R-2.12)

Package Downloads

Package Source NTW_1.2.0.tar.gz
Windows Binary NTW_1.2.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary NTW_1.2.0.tgz
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