MEDME

Modelling Experimental Data from MeDIP Enrichment

Bioconductor version: 2.8

MEDME allows the prediction of absolute and relative methylation levels based on measures obtained by MeDIP-microarray experiments

Author: Mattia Pelizzola and Annette Molinaro

Maintainer: Mattia Pelizzola <mattia.pelizzola at gmail.com>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("MEDME")

To cite this package in a publication, start R and enter:

    citation("MEDME")

Documentation

PDF R Script MEDME.pdf
PDF   Reference Manual

Details

biocViews Microarray, CpGIsland
Depends grDevices, graphics, methods, stats, utils
Imports Biostrings, MASS, drc
Suggests BSgenome.Hsapiens.UCSC.hg18, BSgenome.Mmusculus.UCSC.mm9
System Requirements
License GPL (>= 2)
URL
Depends On Me
Imports Me
Suggests Me
Version 1.12.0
Since Bioconductor 2.3 (R-2.8)

Package Downloads

Package Source MEDME_1.12.0.tar.gz
Windows Binary MEDME_1.12.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary MEDME_1.12.0.tgz
Package Downloads Report Download Stats

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