CRImage a package to classify cells and calculate tumour cellularity

Bioconductor version: 2.8

CRImage provides functionality to process and analyze images, in particular to classify cells in biological images. Furthermore, in the context of tumor images, it provides functionality to calculate tumour cellularity.

Author: Henrik Failmezger <failmezger at>, Yinyin Yuan <Yinyin.Yuan at>, Oscar Rueda <oscar.rueda at>, Florian Markowetz <Florian.Markowetz at>

Maintainer: Henrik Failmezger <failmezger at>, Yinyin Yuan <Yinyin.Yuan at>

To install this package, start R and enter:


To cite this package in a publication, start R and enter:



PDF cellularity2.pdf
PDF R Script CRImage Manual
PDF labeledImage.pdf
PDF   Reference Manual


biocViews CellBiology, Classification
Depends EBImage
Imports MASS, e1071, foreach
System Requirements
License Artistic-2.0
Depends On Me
Imports Me
Suggests Me
Version 1.2.0
Since Bioconductor 2.7 (R-2.12)

Package Downloads

Package Source CRImage_1.2.0.tar.gz
Windows Binary (32- & 64-bit)
MacOS 10.5 (Leopard) binary
Package Downloads Report Download Stats

Workflows »

Common Bioconductor workflows include:


Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Fred Hutchinson Cancer Research Center