BayesPeak

Bayesian Analysis of ChIP-seq Data

Bioconductor version: 2.8

This package is an implementation of the BayesPeak algorithm for peak-calling in ChIP-seq data.

Author: Christiana Spyrou, Jonathan Cairns, Rory Stark, Andy Lynch, Simon Tavar\\'{e},

Maintainer: Jonathan Cairns <jmc200 at cam.ac.uk>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("BayesPeak")

To cite this package in a publication, start R and enter:

    citation("BayesPeak")

Documentation

PDF R Script BayesPeak Vignette
PDF regionOFdiag.pdf
PDF   Reference Manual

Details

biocViews ChIPseq
Depends IRanges
Imports IRanges, graphics
Suggests
System Requirements
License GPL (>= 2)
URL
Depends On Me
Imports Me
Suggests Me
Version 1.4.3
Since Bioconductor 2.6 (R-2.11)

Package Downloads

Package Source BayesPeak_1.4.3.tar.gz
Windows Binary BayesPeak_1.4.3.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary BayesPeak_1.4.3.tgz
Package Downloads Report Download Stats

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