Bioconductor Task View: ReportWriting

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Package Maintainer Title
affycoretools James W. MacDonald Functions useful for those doing repetitive analyses with Affymetrix GeneChips.
AffyExpress Xuejun Arthur Li Affymetrix Quality Assessment and Analysis Tool
annaffy Colin A. Smith Annotation tools for Affymetrix biological metadata
arrayQualityMetrics Audrey Kauffmann Quality metrics on microarray data sets
ArrayTools Arthur Li geneChip Analysis Package
DynDoc Biocore Team c/o BioC user list Dynamic document tools
exonmap Crispin Miller High level analysis of Affymetrix exon array data
simpleaffy Crispin Miller Very simple high level analysis of Affymetrix data
xmapbridge Tim Yates Export plotting files to the xmapBridge for visualisation in X:Map
yaqcaffy Laurent Gatto Affymetrix expression data quality control and reproducibility analysis