Bioconductor Task View: GO

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Package Maintainer Title
annaffy Colin A. Smith Annotation tools for Affymetrix biological metadata
annotate Biocore Team c/o BioC user list Annotation for microarrays
Category Robert Gentleman Category Analysis
globaltest Jelle Goeman Testing Association of Groups of Genes with a Clinical Variable
goProfiles Alex Sanchez goProfiles: an R package for the statistical analysis of functional profiles
GOstats Robert Gentleman Tools for manipulating GO and microarrays.
goTools Agnes Paquet Functions for Gene Ontology database
SemSim Xiang Guo Gene Ontology-based Semantic Similarity Measures