Package: illuminaio =================== Version: 0.6.1. [2014-09-23] o Fixed issues with vignette and CITATION. Version: 0.6.0 [2014-04-11] o The version number was bumped for the Bioconductor release version, which is now BioC v2.14 for R (>= 3.1.0). Version: 0.5.6 [2014-03-10] o Added a CITATION file, cf. citation("illuminaio"). Version: 0.5.5 [2014-01-19] o Added support for encrypted IDAT files where not all data fields are of the same length e.g. HumanHap550 v1. Version: 0.5.2 [2013-11-05] o moved testData to IlluminaDataTestFiles. o Added unitTests for encrypted IDATs. Version: 0.5.1 [2013-11-04] o Resshuffled internal code in readIDAT_nonenc so that seek() is always forward based. Version: 0.5.0 [2013-10-14; BioC 2.14] o The version number was bumped for the Bioconductor devel version. o No updates. Version: 0.4.0 [2013-10-14; BioC 2.13] o The version number was bumped for the Bioconductor release version. o No updates. Version: 0.3.9 [2013-09-13] o Added vignette giving examples of usage and demonstrating comparison with GenomeStudio output; Version: 0.3.8 [2013-09-12] o Bug fixes, renaming of readIDAT_bin to readIDAT_nonenc. Version: 0.3.6 [2013-08-21] o Added one parent function readIDAT which checks file format and dispatches to the relevant subfunction. Version: 0.3.5 [2013-08-02] o Cleaned up internal code of readBPM(). o ROBUSTNESS: Added unit tests for readBPM(). Note that these are only run if environment variable '_R_CHECK_FULL_' is set, i.e. they will *not* be perfomed on the Bioconductor servers. Version: 0.3.0 [2013-04-03; BioC 2.13] o The version number was bumped for the Bioconductor devel version. o No updates. Version: 0.2.0 [2013-04-03; BioC 2.12] o The version number was bumped for the Bioconductor release version. o No updates. Version: 0.1.5 [2012-11-28] o Fixed typos in help for readBPM() and readIDAT(). Version: 0.1.4 [2012-11-27] o Exporting readBPM(). Version: 0.1.3 [2012-11-12] o Added system tests for readIDAT() on example files from 'hapmap370k' package. Version: 0.1.2 [2012-11-07] o Now readIDAT() guarantees to close any connections it opens. Also tidied up its code by defining local read functions. Version: 0.1.1 [2012-1] o Added system tests for readIDAT() on example files from 'minfiData' package. Version: 0.1.0 [2012-10-09] o Package added to the BioC repository. o Created.