Implementation of gene expression anti-profiles


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Documentation for package ‘antiProfiles’ version 1.4.0

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antiProfiles-package Gene Expression Anti-profiles
AntiProfile-class A gene expression anti-profile
AntiProfileStats-class Statistics used to build anti-profiles
apCount Obtain the anti-profile score for a set of samples
apCount-method Obtain the anti-profile score for a set of samples
apReorder Reorder an AntiProfileStats object
apReorder-method Reorder an AntiProfileStats object
apStats Compute statistics used to construct antiProfile
buildAntiProfile Create an anti-profile from a AntiProfileStats object
buildAntiProfile-method Create an anti-profile from a AntiProfileStats object
getNormalRegions A gene expression anti-profile
getNormalRegions-method A gene expression anti-profile
getNormalRegions-method A gene expression anti-profile using tissue-specific regions
getNormalTissueRegions A gene expression anti-profile using tissue-specific regions
getNormalTissueRegions-method A gene expression anti-profile using tissue-specific regions
getProbesetIds A gene expression anti-profile
getProbesetIds-method A gene expression anti-profile
getProbesetIds-method A gene expression anti-profile using tissue-specific regions
getProbeStats Statistics used to build anti-profiles
getProbeStats-method Statistics used to build anti-profiles
TissueSpecAntiProfile-class A gene expression anti-profile using tissue-specific regions