To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("FunciSNP.data")

In most cases, you don't need to download the package archive at all.

FunciSNP.data

Various data sets for use with the FunciSNP package

Bioconductor version: 2.13

Data sets needed for FunciSNP to integrate information from GWAS, 1000genomes and chromatin feature, in order to identify functional SNP in coding or non-coding regions.

Author: Simon G. Coetzee <simon at simoncoetzee.com> and Houtan Noushmehr, PhD <houtan at usp.br>

Maintainer: Simon G. Coetzee <scoetzee at gmail.com>

Citation (from within R, enter citation("FunciSNP.data")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("FunciSNP.data")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("FunciSNP.data")

 

PDF R Script FunciSNP Vignette
PDF   Reference Manual
Text   NEWS

Details

biocViews Annotation, DataImport, DataRepresentation, ExperimentData, Infrastructure, SequenceMatching
Version 0.99.4
License GPL-3
Depends R (>= 2.14.0)
Imports rtracklayer
Suggests
System Requirements
URL http://coetzeeseq.usc.edu/publication/Coetzee_SG_et_al_2012/
Depends On Me FunciSNP
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source FunciSNP.data_0.99.4.tar.gz
Windows Binary FunciSNP.data_0.99.4.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) FunciSNP.data_0.99.4.tgz
Browse/checkout source (username/password: readonly)
Package Downloads Report Download Stats

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Fred Hutchinson Cancer Research Center