To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("BSgenome.Celegans.UCSC.ce2")

In most cases, you don't need to download the package archive at all.

BSgenome.Celegans.UCSC.ce2

Caenorhabditis elegans (Worm) full genome (UCSC version ce2)

Bioconductor version: 2.13

Caenorhabditis elegans (Worm) full genome as provided by UCSC (ce2, Mar. 2004) and stored in Biostrings objects.

Author: The Bioconductor Dev Team

Maintainer: Bioconductor Package Maintainer <maintainer at bioconductor.org>

Citation (from within R, enter citation("BSgenome.Celegans.UCSC.ce2")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("BSgenome.Celegans.UCSC.ce2")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BSgenome.Celegans.UCSC.ce2")

 

PDF   Reference Manual

Details

biocViews AnnotationData, Caenorhabditis_elegans, Genetics
Version 1.3.19
License Artistic-2.0
Depends BSgenome(>= 1.25.4)
Imports BSgenome
Suggests
System Requirements
URL
Depends On Me REDseq
Imports Me
Suggests Me Biostrings, BSgenome, GenomicFeatures, IRanges

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source BSgenome.Celegans.UCSC.ce2_1.3.19.tar.gz
Windows Binary BSgenome.Celegans.UCSC.ce2_1.3.19.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) BSgenome.Celegans.UCSC.ce2_1.3.19.tgz
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