source("http://bioconductor.org/biocLite.R")
biocLite("GSEAlm")

GSEAlm

Linear Model Toolset for Gene Set Enrichment Analysis

Bioconductor version: 2.13

Models and methods for fitting linear models to gene expression data, together with tools for computing and using various regression diagnostics.

Author: Assaf Oron, Robert Gentleman (with contributions from S. Falcon and Z. Jiang)

Maintainer: Assaf Oron <assaf at uw.edu>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("GSEAlm")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("GSEAlm")

 

PDF	R Script	Linear models in GSEA
PDF		Reference Manual

Details

biocViews	Bioinformatics, Microarray, Software
Version	1.22.0
In Bioconductor since	BioC 2.2 (R-2.7)
License	Artistic-2.0
Depends	Biobase
Imports
Suggests	GSEABase, Category, multtest, ALL, annotate, hgu95av2.db, genefilter, GOstats, RColorBrewer
System Requirements
URL
Depends On Me
Imports Me	gCMAP
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	GSEAlm_1.22.0.tar.gz
Windows Binary	GSEAlm_1.22.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	GSEAlm_1.22.0.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats