Illumina 450 methylation array normalization and metrics

Bioconductor version: Release (2.12)

15 flavours of betas and three performance metrics, with methods for objects produced by methylumi, minfi and IMA packages.

Author: Leonard C Schalkwyk, Ruth Pidsley, Chloe CY Wong, with functions contributed by Nizar Touleimat, Matthieu Defrance, Andrew Teschendorff, Jovana Maksimovic

Maintainer: Leo <Leonard.Schalkwyk at kcl.ac.uk>

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biocViews DNAMethylation, Microarray, Preprocessing, QualityControl, Software, TwoChannel
Version 1.0.3
In Bioconductor since BioC 2.13 (R-2.18)
License GPL-3
Depends R (>= 2.10), limma, methods, matrixStats, methylumi, lumi, IlluminaHumanMethylation450k.db, ROC
Suggests RPMM
System Requirements
Depends On Me
Imports Me
Suggests Me

Package Downloads

Package Source wateRmelon_1.0.3.tar.gz
Windows Binary wateRmelon_1.0.3.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) wateRmelon_1.0.3.tgz
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