spade
SPADE -- An analysis and visualization tool for Flow Cytometry
Bioconductor version: Release (2.12)
SPADE, or Spanning tree Progression of Density normalized Events, is an analysis and visualization tool for high dimensional flow cytometry data that organizes cells into hierarchies of related phenotypes.
Author: M. Linderman, P. Qiu, E. Simonds, Z. Bjornson
Maintainer: Michael Linderman <michael.d.linderman at gmail.com>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("spade")
To cite this package in a publication, start R and enter:
citation("spade")
Documentation
| R Script | spade package | |
| Reference Manual | ||
| Text | LICENSE |
Details
| biocViews | Clustering, FlowCytometry, GUI, GraphsAndNetworks, Software, Visualization |
| Version | 1.8.0 |
| License | GPL-2 |
| Depends | R (>= 2.11), igraph0 |
| Imports | Biobase, flowCore |
| Suggests | flowViz |
| System Requirements | |
| URL | http://cytospade.org |
| Depends On Me | |
| Imports Me | |
| Suggests Me |
Package Downloads
| Package Source | spade_1.8.0.tar.gz |
| Windows Binary | spade_1.8.0.zip (32- & 64-bit) |
| Mac OS X 10.6 (Snow Leopard) | spade_1.8.0.tgz |
| Package Downloads Report | Download Stats |
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