Platform for integrative analysis of omics data

Bioconductor version: Release (2.12)

Piano performs gene set analysis using various statistical methods, from different gene level statistics and a wide range of gene-set collections. Furthermore, the Piano package contains functions for combining the results of multiple runs of gene set analyses.

Author: Leif Varemo <piano.rpkg at gmail.com> and Intawat Nookaew <piano.rpkg at gmail.com>

Maintainer: Leif Varemo <piano.rpkg at gmail.com>

To install this package, start R and enter:


To cite this package in a publication, start R and enter:



PDF R Script Piano - Platform for Integrative Analysis of Omics data
PDF   Reference Manual
Text   NEWS


biocViews DataImport, DataRepresentation, DifferentialExpression, Microarray, Preprocessing, QualityControl, Software, Visualization
Version 1.0.7
In Bioconductor since BioC 2.13 (R-2.18)
License GPL (>=2)
Depends R (>= 2.14.0)
Imports Biobase, gplots, igraph, relations, marray
Suggests yeast2.db, rsbml, plotrix, limma, affy, plier, affyPLM, gtools, biomaRt
System Requirements
URL http://www.sysbio.se/piano
Depends On Me
Imports Me
Suggests Me

Package Downloads

Package Source piano_1.0.7.tar.gz
Windows Binary piano_1.0.7.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) piano_1.0.7.tgz
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