SPEM

S-system parameter estimation method

Bioconductor version: Release (2.12)

This package can optimize the parameter in S-system models given time series data

Author: Xinyi YANG Developer, Jennifer E. DENT Developer and Christine NARDINI Supervisor

Maintainer: Xinyi YANG <yangxinyi at picb.ac.cn>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("SPEM")

To cite this package in a publication, start R and enter:

    citation("SPEM")

Documentation

PDF Flowchartmain.pdf
PDF S_system.pdf
PDF sospathway.pdf
PDF R Script Vignette for SPEM
PDF   Reference Manual
Text   NEWS

Details

biocViews Bioinformatics, NetworkAnalysis, NetworkInference, Software
Version 1.0.0
In Bioconductor since BioC 2.13 (R-2.18)
License GPL-2
Depends R (>= 2.15.1), Rsolnp, Biobase, methods
Imports
Suggests
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Downloads

Package Source SPEM_1.0.0.tar.gz
Windows Binary SPEM_1.0.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) SPEM_1.0.0.tgz
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