Predict gene network using an Ordinary Differential Equation (ODE) based method

Bioconductor version: Release (2.12)

This package predicts the gene-gene interaction network and identifies the direct transcriptional targets of the perturbation using an ODE (Ordinary Differential Equation) based method.

Author: Wei Xiao, Yin Jin, Darong Lai, Xinyi Yang, Yuanhua Liu, Christine Nardini

Maintainer: Yuanhua Liu <liuyuanhua at picb.ac.cn>

To install this package, start R and enter:


To cite this package in a publication, start R and enter:



PDF R Script NTW vignette
PDF   Reference Manual
Text   NEWS


biocViews Preprocessing, Software
Version 1.10.0
In Bioconductor since BioC 2.7 (R-2.12)
License GPL-2
Depends R (>= 2.3.0)
Imports mvtnorm, stats, utils
System Requirements
Depends On Me
Imports Me
Suggests Me

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Package Source NTW_1.10.0.tar.gz
Windows Binary NTW_1.10.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) NTW_1.10.0.tgz
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