GeneGroupAnalysis

Gene Functional Class Analysis

Bioconductor version: Release (2.12)

R package providing functions to peform gene-set significance analysis over simple cross-sectional or time series data designs.

Author: Alejandro Quiroz-Zarate and John Quackenbush

Maintainer: Alejandro Quiroz-Zarate <aquiroz at hsph.harvard.edu>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("GeneGroupAnalysis")

To cite this package in a publication, start R and enter:

    citation("GeneGroupAnalysis")

Documentation

PDF R Script GeneGroupAnalysis: a package for performance assessment and comparison for survival analysis
PDF   Reference Manual
Text   NEWS

Details

biocViews CrossSectional, DifferentialExpression, GeneExpression, MultipleComparisons, Software, TimeCourse
Version 1.6.0
In Bioconductor since BioC 2.10 (R-2.15)
License Artistic-2.0
Depends R (>= 2.10), MCMCpack, GO.db, breastCancerVDX, rheumaticConditionWOLLBOLD, hgu133a.db, hgu133plus2.db
Imports AnnotationDbi, annotate, tcltk
Suggests
System Requirements
URL http://compbio.dfci.harvard.edu/
Depends On Me
Imports Me
Suggests Me

Package Downloads

Package Source GeneGroupAnalysis_1.6.0.tar.gz
Windows Binary GeneGroupAnalysis_1.6.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) GeneGroupAnalysis_1.6.0.tgz
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