Vignettes of package chopsticks

Example of genome-wide association testing:
Introduction to chopsticks for analysis of GWA studies
snpStats Bugs:
Catalogs of Bugs in current Bioc snpMatrix and snpStats . See also the snpStats Bugs 1.3.6 and 1.5.4 versions.<
snpMatrix 4-digit Series:
escribes the snpMatrix 4-digit series and the "less buggy" snpStats 4-d series
An R package for analysis of whole-genome association studies:
Initial paper in "Human Heredity" (now rather out of date, but it describes the philosophy of the package)