Light-weight methods for normalization and visualization of microarray data using only basic R data types

Bioconductor version: Release (2.11)

Methods for microarray analysis that take basic data types such as matrices and lists of vectors. These methods can be used standalone, be utilized in other packages, or be wrapped up in higher-level classes.

Author: Henrik Bengtsson <henrikb at>

Maintainer: Henrik Bengtsson <henrikb at>

To install this package, start R and enter:


To cite this package in a publication, start R and enter:



PDF   Reference Manual
Text   NEWS


biocViews Infrastructure, Microarray, MultiChannel, OneChannel, Preprocessing, Software, TwoChannel, Visualization
Version 1.28.0
In Bioconductor since BioC 1.9 (R-2.4)
License GPL (>= 2)
Depends R (>= 2.10.0), matrixStats (>= 0.5.3)
Imports R.methodsS3 (>= 1.4.2)
Suggests R.oo (>= 1.9.9), R.utils (>= 1.16.2), princurve (>= 1.1-11)
System Requirements
Depends On Me EDASeq
Imports Me
Suggests Me

Package Downloads

Package Source aroma.light_1.28.0.tar.gz
Windows Binary (32- & 64-bit)
MacOS 10.5 (Leopard) aroma.light_1.28.0.tgz
Package Downloads Report Download Stats

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Fred Hutchinson Cancer Research Center