Read density map construction and accession. Visualization of ChIPSeq and RNASeq data sets.

Bioconductor version: Release (2.11)

This package provides efficient tools to generate, access and display read densities of sequencing based data sets such as from RNA-Seq and ChIP-Seq.

Author: Julius Muller

Maintainer: Julius Muller <ju-mu at>

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PDF R Script An introduction to TransView
PDF   Reference Manual
Text   NEWS


biocViews Bioinformatics,DNAMethylation,GeneExpression,Transcription, Methylseq,DataImport,Visualization,Clustering,MultipleComparisons, Microarray,Sequencing,HighThroughputSequencing,ChIPseq,RNAseq, Software
Version 1.0.7
In Bioconductor since BioC 2.11 (R-2.15)
License GPL-3
Depends methods,GenomicRanges
Imports Rsamtools,zlibbioc,gplots,IRanges
Suggests RUnit,pasillaBamSubset
System Requirements
Depends On Me
Imports Me
Suggests Me

Package Downloads

Package Source TransView_1.0.7.tar.gz
Windows Binary (32- & 64-bit)
MacOS 10.5 (Leopard) TransView_1.0.7.tgz
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