Bioconductor version: 2.10
Spot segmentation via model-based clustering and gridding for blocks within microarray slides, as described in Li et al, Robust Model-Based Segmentation of Microarray Images, Technical Report no. 473, Department of Statistics, University of Washington.
Author: Qunhua Li, Chris Fraley, Adrian Raftery Department of Statistics, University of Washington
Maintainer: Chris Fraley <fraley at stat.washington.edu>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R") biocLite("spotSegmentation")
To cite this package in a publication, start R and enter:
citation("spotSegmentation")
R Script | spotsegdoc.pdf | |
Reference Manual |
biocViews | Microarray, Preprocessing, QualityControl, Software, TwoChannel |
Depends | R (>= 2.10), mclust |
Imports | |
Suggests | |
System Requirements | |
License | GPL (>= 2) |
URL | http://www.stat.washington.edu/fraley |
Depends On Me | |
Imports Me | |
Suggests Me | |
Version | 1.30.0 |
Since | Bioconductor 1.6 (R-2.1) or earlier |
Package Source | spotSegmentation_1.30.0.tar.gz |
Windows Binary | spotSegmentation_1.30.0.zip (32- & 64-bit) |
MacOS 10.5 (Leopard) binary | spotSegmentation_1.30.0.tgz |
Package Downloads Report | Download Stats |
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