Operations on genomic intervals

Bioconductor version: 2.10

This package defines classes for representing genomic intervals and provides functions and methods for working with these. Note: The package provides the basic infrastructure for and is enhanced by the package 'girafe'.

Author: Julien Gagneur <gagneur at>, Joern Toedling, Richard Bourgon, Nicolas Delhomme

Maintainer: Julien Gagneur <gagneur at>

To install this package, start R and enter:


To cite this package in a publication, start R and enter:



PDF R Script Overview of the genomeIntervals package.
PDF   Reference Manual


biocViews DataImport, Genetics, Infrastructure, Software
Depends R (>= 2.15.0), methods, intervals (>= 0.13.3), BiocGenerics(>= 0.1.11)
Imports methods, Biobase
System Requirements
License Artistic-2.0
Depends On Me easyRNASeq, girafe, HiTC
Imports Me
Suggests Me RnaSeqTutorial
Version 1.12.0
Since Bioconductor 2.4 (R-2.9)

Package Downloads

Package Source genomeIntervals_1.12.0.tar.gz
Windows Binary (32- & 64-bit)
MacOS 10.5 (Leopard) binary genomeIntervals_1.12.0.tgz
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