Linear Model of background subtraction and the Langmuir isotherm

Bioconductor version: 2.10

affyILM is a preprocessing tool which estimates gene expression levels for Affymetrix Gene Chips. Input from physical chemistry is employed to first background subtract intensities before calculating concentrations on behalf of the Langmuir model.

Author: K. Myriam Kroll, Fabrice Berger, Gerard Barkema, Enrico Carlon

Maintainer: Myriam Kroll and Fabrice Berger <fabrice.berger at>

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PDF R Script affyILM1.3.0
PDF   Reference Manual


biocViews Microarray, OneChannel, Preprocessing, Software
Depends R (>= 2.10.0), methods, gcrma
Imports affxparser(>= 1.16.0), affy, graphics, methods, Biobase
Suggests AffymetrixDataTestFiles
System Requirements
License GPL version 3
Depends On Me
Imports Me
Suggests Me
Version 1.8.0
Since Bioconductor 2.6 (R-2.11)

Package Downloads

Package Source affyILM_1.8.0.tar.gz
Windows Binary (32- & 64-bit)
MacOS 10.5 (Leopard) binary affyILM_1.8.0.tgz
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