SMAP
A Segmental Maximum A Posteriori Approach to Array-CGH Copy Number Profiling
Bioconductor version: 2.10
Functions and classes for DNA copy number profiling of array-CGH data
Author: Robin Andersson <robin.andersson at lcb.uu.se>
Maintainer: Robin Andersson <robin.andersson at lcb.uu.se>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("SMAP")
To cite this package in a publication, start R and enter:
citation("SMAP")
Documentation
| R Script | SMAP | |
| Reference Manual |
Details
| biocViews | CopyNumberVariants, Microarray, Software, TwoChannel |
| Depends | R (>= 2.10), methods |
| Imports | |
| Suggests | |
| System Requirements | |
| License | GPL-2 |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Version | 1.20.0 |
| Since | Bioconductor 2.1 (R-2.6) |
Package Downloads
| Package Source | SMAP_1.20.0.tar.gz |
| Windows Binary | SMAP_1.20.0.zip (32- & 64-bit) |
| MacOS 10.5 (Leopard) binary | SMAP_1.20.0.tgz |
| Package Downloads Report | Download Stats |
Common Bioconductor workflows include:
- Oligonucleotide Arrays
- High-throughput Sequencing
- Annotation
- Variants
- Flow Cytometry and other assays
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