RamiGO

AmiGO visualize R interface

Bioconductor version: 2.10

R interface sending requests to AmiGO visualize, retrieving DAG GO trees, parsing GraphViz DOT format files and exporting GML files for Cytoscape. Also uses RCytoscape to interactively display AmiGO trees in Cytoscape.

Author: Markus Schroeder, Daniel Gusenleitner, Aedin Culhane, Benjamin Haibe-Kains, John Quackenbush

Maintainer: Markus Schroeder <mschroed at jimmy.harvard.edu>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("RamiGO")

To cite this package in a publication, start R and enter:

    citation("RamiGO")

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