An R package for nucleosome positioning prediction

Bioconductor version: 2.10

NuPoP is an R package for Nucleosome Positioning Prediction.This package is built upon a duration hidden Markov model proposed in Xi et al, 2010; Wang et al, 2008. The core of the package was written in Fotran. In addition to the R package, a stand-alone Fortran software tool is also available at

Author: Ji-Ping Wang <jzwang at>; Liqun Xi <lxi700 at>

Maintainer: Ji-Ping Wang<jzwang at>

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PDF R Script An R package for Nucleosome positioning prediction
PDF R Script NuPoP-manual.pdf
PDF   Reference Manual


biocViews Software, genetics,visualization,classification
Depends R (>= 2.10)
System Requirements
License GPL-2
Depends On Me
Imports Me
Suggests Me
Version 1.6.0
Since Bioconductor 2.7 (R-2.12)

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Package Source NuPoP_1.6.0.tar.gz
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MacOS 10.5 (Leopard) binary NuPoP_1.6.0.tgz
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