Dynamic Transcriptome Analysis

Bioconductor version: 2.10

Dynamic Transcriptome Analysis (DTA) can monitor the cellular response to perturbations with higher sensitivity and temporal resolution than standard transcriptomics. The package implements the underlying kinetic modeling approach capable of the precise determination of synthesis- and decay rates from individual microarray or RNAseq measurements.

Author: Bjoern Schwalb, Benedikt Zacher, Sebastian Duemcke, Achim Tresch

Maintainer: Bjoern Schwalb <schwalb at lmb.uni-muenchen.de>

To install this package, start R and enter:


To cite this package in a publication, start R and enter:



PDF R Script A guide to Dynamic Transcriptome Analysis (DTA)
PDF   Reference Manual


biocViews DifferentialExpression, GeneExpression, Microarray, Software, Transcription
Depends R (>= 2.10), LSD
Imports scatterplot3d
System Requirements
License Artistic-2.0
Depends On Me
Imports Me
Suggests Me
Version 2.2.0
Since Bioconductor 2.9 (R-2.14)

Package Downloads

Package Source DTA_2.2.0.tar.gz
Windows Binary DTA_2.2.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) binary DTA_2.2.0.tgz
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