BRAIN
Baffling Recursive Algorithm for Isotope distributioN calculations
Bioconductor version: 2.10
Package for calculating aggregated isotopic distribution and exact center-masses for chemical substances (in this version composed of C, H, N, O and S). This is an implementation of the BRAIN algorithm described in the paper by J. Claesen, P. Dittwald, T. Burzykowski and D. Valkenborg.
Author: Piotr Dittwald, with contributions of Dirk Valkenborg and Jurgen Claesen
Maintainer: Piotr Dittwald <piotr.dittwald at mimuw.edu.pl>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("BRAIN")
To cite this package in a publication, start R and enter:
citation("BRAIN")
Documentation
| R Script | BRAIN Usage | |
| Reference Manual |
Details
| biocViews | Bioinformatics, Mass spectrometry, Proteomics, Software |
| Depends | R (>= 2.8.1), PolynomF, Biostrings, lattice |
| Imports | |
| Suggests | |
| System Requirements | |
| License | GPL-2 |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Version | 1.0.0 |
| Since | Bioconductor 2.10 (R-2.15) |
Package Downloads
| Package Source | BRAIN_1.0.0.tar.gz |
| Windows Binary | BRAIN_1.0.0.zip (32- & 64-bit) |
| MacOS 10.5 (Leopard) binary | BRAIN_1.0.0.tgz |
| Package Downloads Report | Download Stats |
Common Bioconductor workflows include:
- Oligonucleotide Arrays
- High-throughput Sequencing
- Annotation
- Variants
- Flow Cytometry and other assays
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