| Package | Maintainer | Title |
|---|---|---|
| bgafun | Iain Wallace | BGAfun A method to identify specifity determining residues in protein families |
| ctc | Antoine Lucas | Cluster and Tree Conversion. |
| gpls | Biocore Team c/o BioC user list | Classification using generalized partial least squares |
| logicFS | Holger Schwender | Identification of SNP Interactions |
| made4 | Aedin Culhane | Multivariate analysis of microarray data using ADE4 |
| maigesPack | Gustavo H. Esteves | Functions to handle cDNA microarray data, including several methods of data analysis |
| MCRestimate | Markus Ruschhaupt | Misclassification error estimation with cross-validation |
| MiPP | Sukwoo Kim | Misclassification Penalized Posterior Classification |
| MLInterfaces | V. Carey | Uniform interfaces to R machine learning procedures for data in Bioconductor containers |
| pamr | Rob Tibshirani | Pam: prediction analysis for microarrays |
| pdmclass | James W. MacDonald | Classification of Microarray Samples using Penalized Discriminant Methods |
| rHVDM | Martino Barenco | Hidden Variable Dynamic Modeling |
| vbmp | Nicola Lama | Variational Bayesian Multinomial Probit Regression |