freesurfer: Wrapper Functions for 'FreeSurfer'
Wrapper functions that interface with 'Freesurfer'
<https://surfer.nmr.mgh.harvard.edu/>, a powerful and commonly-used
'neuroimaging' software, using system commands. The goal is to be able
to interface with 'Freesurfer' completely in R, where you pass R
objects of class 'nifti', implemented by package 'oro.nifti', and the
function executes an 'Freesurfer' command and returns an R object of
class 'nifti' or necessary output.
| Version: |
1.9.0 |
| Depends: |
R (≥ 4.1) |
| Imports: |
cli, lifecycle, methods, neurobase, R.utils, tools, stats, utils |
| Suggests: |
covr, knitr, oro.nifti (≥ 0.7), rgl, rmarkdown, testthat (≥
3.0.0), withr |
| Published: |
2026-10-07 |
| DOI: |
10.32614/CRAN.package.freesurfer |
| Author: |
John Muschelli 
[aut, cre, cph],
Athanasia Mo Mowinckel
[ctb] |
| Maintainer: |
John Muschelli <muschellij2 at gmail.com> |
| BugReports: |
https://github.com/muschellij2/freesurfer/issues |
| License: |
GPL-3 |
| URL: |
https://johnmuschelli.com/freesurfer/,
https://github.com/muschellij2/freesurfer |
| NeedsCompilation: |
no |
| SystemRequirements: |
FreeSurfer (https://freesurfer.net/) |
| Citation: |
freesurfer citation info |
| Materials: |
README, NEWS |
| CRAN checks: |
freesurfer results |
Documentation:
Downloads:
Reverse dependencies:
Linking:
Please use the canonical form
https://CRAN.R-project.org/package=freesurfer
to link to this page.