Last updated on 2025-12-02 14:50:14 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 14.27 | 250.38 | 264.65 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.29 | 233.06 | 243.35 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 31.00 | 284.18 | 315.18 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 39.00 | 322.78 | 361.78 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 25.00 | 189.00 | 214.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.60 | 241.19 | 256.79 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.30 | 269.49 | 283.79 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 16.00 | 198.00 | 214.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 186.00 | 207.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 12.00 | 193.00 | 205.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 233.00 | 257.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [84s/145s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.635, system: 0.043, elapsed: 2.660 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.531, system: 0.064, elapsed: 15.658 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.014, elapsed: 0.362 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.926, system: 0.186, elapsed: 7.116 seconds]
Computing values for grid cells...
... done. [user: 0.190, system: 0.006, elapsed: 0.331 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.056, system: 0.341, elapsed: 27.120 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.586, system: 0.035, elapsed: 2.425 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.554, system: 0.076, elapsed: 13.533 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.198, system: 0.013, elapsed: 0.335 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.999, system: 0.175, elapsed: 6.825 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.009, elapsed: 0.243 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.085, system: 0.347, elapsed: 24.312 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.673, system: 0.048, elapsed: 2.566 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.611, system: 0.084, elapsed: 19.188 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.208, system: 0.011, elapsed: 0.521 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.906, system: 0.178, elapsed: 10.708 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.004, elapsed: 0.470 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.243, system: 0.235, elapsed: 2.008 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.493, system: 0.606, elapsed: 36.959 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.561, system: 0.037, elapsed: 3.768 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.607, system: 0.080, elapsed: 18.706 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.012, elapsed: 0.314 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.820, system: 0.173, elapsed: 5.797 seconds]
Computing values for grid cells...
... done. [user: 0.176, system: 0.004, elapsed: 0.261 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.899, system: 0.472, elapsed: 18.158 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.909, system: 0.799, elapsed: 48.297 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [84s/142s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.665, system: 0.044, elapsed: 2.857 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.622, system: 0.101, elapsed: 15.381 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.015, elapsed: 0.350 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.788, system: 0.209, elapsed: 6.374 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.004, elapsed: 0.236 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.008, system: 0.397, elapsed: 26.167 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.618, system: 0.040, elapsed: 2.214 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.486, system: 0.081, elapsed: 15.492 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.199, system: 0.013, elapsed: 0.305 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.024, system: 0.188, elapsed: 6.485 seconds]
Computing values for grid cells...
... done. [user: 0.179, system: 0.004, elapsed: 0.259 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.057, system: 0.354, elapsed: 25.561 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.618, system: 0.040, elapsed: 2.533 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.626, system: 0.189, elapsed: 14.570 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.195, system: 0.013, elapsed: 0.267 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.923, system: 0.218, elapsed: 6.759 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.008, elapsed: 0.336 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.178, system: 0.240, elapsed: 1.929 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.392, system: 0.756, elapsed: 27.703 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.630, system: 0.050, elapsed: 4.470 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.462, system: 0.096, elapsed: 22.788 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.011, elapsed: 0.338 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.916, system: 0.193, elapsed: 6.948 seconds]
Computing values for grid cells...
... done. [user: 0.166, system: 0.004, elapsed: 0.278 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.765, system: 0.474, elapsed: 17.373 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.799, system: 0.859, elapsed: 53.609 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64