Last updated on 2025-07-04 14:49:32 CEST.
Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
---|---|---|---|---|---|---|
r-devel-linux-x86_64-debian-clang | 1.1.3 | 13.96 | 194.30 | 208.26 | OK | |
r-devel-linux-x86_64-debian-gcc | 1.1.3 | 11.23 | 199.74 | 210.97 | OK | |
r-devel-linux-x86_64-fedora-clang | 1.1.4 | 335.99 | OK | |||
r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 392.69 | OK | |||
r-devel-windows-x86_64 | 1.1.3 | 19.00 | 159.00 | 178.00 | OK | |
r-patched-linux-x86_64 | 1.1.3 | 15.52 | 236.32 | 251.84 | OK | |
r-release-linux-x86_64 | 1.1.3 | 14.35 | 218.61 | 232.96 | OK | |
r-release-macos-arm64 | 1.0.5 | 41.00 | OK | |||
r-release-macos-x86_64 | 1.1.4 | 183.00 | ERROR | |||
r-release-windows-x86_64 | 1.1.4 | 19.00 | 183.00 | 202.00 | OK | |
r-oldrel-macos-arm64 | 1.0.5 | 36.00 | OK | |||
r-oldrel-macos-x86_64 | 1.1.4 | 163.00 | ERROR | |||
r-oldrel-windows-x86_64 | 1.1.4 | 20.00 | 226.00 | 246.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [80s/129s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.481, system: 0.041, elapsed: 1.851 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.049, system: 0.124, elapsed: 12.118 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.012, elapsed: 0.209 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.714, system: 0.184, elapsed: 5.155 seconds]
Computing values for grid cells...
... done. [user: 0.165, system: 0.005, elapsed: 0.241 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.149, system: 0.389, elapsed: 20.297 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.499, system: 0.035, elapsed: 2.223 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.105, system: 0.088, elapsed: 13.341 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.189, system: 0.012, elapsed: 0.310 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.789, system: 0.173, elapsed: 6.463 seconds]
Computing values for grid cells...
... done. [user: 0.158, system: 0.002, elapsed: 0.255 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.299, system: 0.329, elapsed: 23.411 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.495, system: 0.029, elapsed: 2.305 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.024, system: 0.058, elapsed: 15.256 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.012, elapsed: 0.349 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.819, system: 0.196, elapsed: 7.024 seconds]
Computing values for grid cells...
... done. [user: 0.158, system: 0.003, elapsed: 0.261 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.138, system: 0.219, elapsed: 1.236 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.437, system: 0.541, elapsed: 27.492 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.468, system: 0.033, elapsed: 2.609 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.089, system: 0.083, elapsed: 14.155 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.192, system: 0.013, elapsed: 0.243 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.830, system: 0.195, elapsed: 7.031 seconds]
Computing values for grid cells...
... done. [user: 0.164, system: 0.003, elapsed: 0.421 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.331, system: 0.479, elapsed: 24.356 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.717, system: 0.839, elapsed: 50.096 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/107s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.557, system: 0.048, elapsed: 1.838 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.825, system: 0.077, elapsed: 10.052 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.017, elapsed: 0.245 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.541, system: 0.191, elapsed: 4.620 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.004, elapsed: 0.266 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.797, system: 0.358, elapsed: 17.685 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.568, system: 0.036, elapsed: 2.607 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.138, system: 0.075, elapsed: 15.606 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.014, elapsed: 0.347 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.552, system: 0.161, elapsed: 6.304 seconds]
Computing values for grid cells...
... done. [user: 0.160, system: 0.004, elapsed: 0.250 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.150, system: 0.311, elapsed: 26.018 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.587, system: 0.037, elapsed: 2.447 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.107, system: 0.054, elapsed: 13.428 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.012, elapsed: 0.286 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.599, system: 0.174, elapsed: 5.335 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.003, elapsed: 0.231 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.062, system: 0.259, elapsed: 0.979 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.336, system: 0.563, elapsed: 23.740 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.465, system: 0.026, elapsed: 2.139 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.185, system: 0.122, elapsed: 13.667 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.187, system: 0.014, elapsed: 0.270 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.552, system: 0.202, elapsed: 4.723 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.008, elapsed: 0.226 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 9.907, system: 0.507, elapsed: 11.818 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.111, system: 0.909, elapsed: 33.752 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64