Last updated on 2026-01-16 02:49:12 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.96 | 245.51 | 258.47 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.60 | 255.14 | 265.74 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 29.00 | 323.15 | 352.15 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 30.00 | 416.93 | 446.93 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 20.00 | 195.00 | 215.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.45 | 276.00 | 291.45 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 14.94 | 238.45 | 253.39 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 10.00 | 225.00 | 235.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 194.00 | 214.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 11.00 | 309.00 | 320.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 254.00 | 278.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [98s/181s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.580, system: 0.047, elapsed: 2.103 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.524, system: 0.107, elapsed: 12.259 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.218, system: 0.017, elapsed: 0.284 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.506, system: 0.648, elapsed: 26.055 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.003, elapsed: 0.180 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.582, system: 0.847, elapsed: 41.557 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.555, system: 0.038, elapsed: 2.008 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.537, system: 0.108, elapsed: 11.546 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.212, system: 0.014, elapsed: 0.303 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 7.876, system: 0.744, elapsed: 45.803 seconds]
Computing values for grid cells...
... done. [user: 0.169, system: 0.003, elapsed: 0.164 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 19.912, system: 0.929, elapsed: 60.546 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.572, system: 0.042, elapsed: 1.457 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.512, system: 0.093, elapsed: 11.334 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.313, system: 0.014, elapsed: 0.670 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.691, system: 0.689, elapsed: 23.780 seconds]
Computing values for grid cells...
... done. [user: 0.185, system: 0.006, elapsed: 0.191 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.283, system: 0.357, elapsed: 1.042 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 20.445, system: 1.260, elapsed: 39.253 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.535, system: 0.038, elapsed: 1.784 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.504, system: 0.048, elapsed: 10.696 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.214, system: 0.014, elapsed: 0.230 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 6.421, system: 0.588, elapsed: 7.056 seconds]
Computing values for grid cells...
... done. [user: 0.184, system: 0.005, elapsed: 0.192 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.162, system: 0.565, elapsed: 12.425 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 29.735, system: 1.282, elapsed: 33.215 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [89s/242s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.826, system: 0.068, elapsed: 2.903 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.722, system: 0.182, elapsed: 28.137 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.209, system: 0.016, elapsed: 0.541 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.455, system: 0.435, elapsed: 12.217 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.004, elapsed: 0.445 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.967, system: 0.733, elapsed: 45.341 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.642, system: 0.035, elapsed: 4.368 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.577, system: 0.077, elapsed: 25.398 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.201, system: 0.013, elapsed: 0.615 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.337, system: 0.390, elapsed: 13.045 seconds]
Computing values for grid cells...
... done. [user: 0.163, system: 0.003, elapsed: 0.392 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.495, system: 0.539, elapsed: 45.463 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.605, system: 0.029, elapsed: 4.318 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.697, system: 0.068, elapsed: 27.756 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.202, system: 0.012, elapsed: 0.689 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.387, system: 0.394, elapsed: 13.288 seconds]
Computing values for grid cells...
... done. [user: 0.185, system: 0.003, elapsed: 0.517 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.240, system: 0.312, elapsed: 2.229 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.988, system: 0.844, elapsed: 50.796 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.616, system: 0.032, elapsed: 4.789 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.880, system: 0.159, elapsed: 34.030 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.206, system: 0.017, elapsed: 0.658 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.528, system: 0.491, elapsed: 13.694 seconds]
Computing values for grid cells...
... done. [user: 0.183, system: 0.010, elapsed: 0.541 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.150, system: 0.687, elapsed: 33.065 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 28.259, system: 1.430, elapsed: 88.975 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64