Last updated on 2026-10-08 19:54:28 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.0 | 13.41 | 133.12 | 146.53 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 1.1.0 | 8.48 | 97.70 | 106.18 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.1.1 | 10.00 | 92.20 | 102.20 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.1 | 10.00 | 101.79 | 111.79 | OK | |
| r-devel-windows-x86_64 | 1.1.0 | 18.00 | 206.00 | 224.00 | ERROR | |
| r-patched-linux-x86_64 | 1.1.0 | 15.45 | 122.51 | 137.96 | OK | |
| r-release-linux-x86_64 | 1.1.0 | OK | ||||
| r-release-macos-arm64 | 1.1.1 | 4.00 | 38.00 | 42.00 | OK | |
| r-release-macos-x86_64 | 1.1.1 | 11.00 | 144.00 | 155.00 | OK | |
| r-release-windows-x86_64 | 1.1.0 | 18.00 | 148.00 | 166.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.1 | 5.00 | 55.00 | 60.00 | OK | |
| r-oldrel-macos-x86_64 | 1.1.1 | 11.00 | 142.00 | 153.00 | OK | |
| r-oldrel-windows-x86_64 | 1.1.1 | 23.00 | 180.00 | 203.00 | OK |
Version: 1.1.0
Check: R code for possible problems
Result: NOTE
Found calls to structure() using deprecated special names:
brglm2/R/brglmFit.R (.Names: 1)
brglm2/R/brnb.R (.Names: 1)
'.Names' should be changed to 'names'.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64
Version: 1.1.0
Check: examples
Result: ERROR
Running examples in ‘brglm2-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: mdyplFit
> ### Title: Fitting function for 'glm()' for maximum Diaconis-Ylvisaker
> ### prior penalized likelihood estimation of logistic regression models
> ### Aliases: mdyplFit mdypl_fit
>
> ### ** Examples
>
>
> data("lizards", package = "brglm2")
> liz_fm <- cbind(grahami, opalinus) ~ height + diameter + light + time
> ## ML fit = MDYPL fit with `alpha = 1`
> liz_ml <- glm(liz_fm, family = binomial(), data = lizards,
+ method = "mdyplFit", alpha = 1)
Error in mdyplControl(epsilon = 1e-08, maxit = 25, trace = FALSE, tol = 1e-11, :
unused arguments (tol = 1e-11, wtol = 0)
Calls: glm -> eval -> eval -> mdyplFit -> mdyplFit -> do.call
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 1.1.0
Check: examples
Result: ERROR
Running examples in 'brglm2-Ex.R' failed
The error most likely occurred in:
> ### Name: mdyplFit
> ### Title: Fitting function for 'glm()' for maximum Diaconis-Ylvisaker
> ### prior penalized likelihood estimation of logistic regression models
> ### Aliases: mdyplFit mdypl_fit
>
> ### ** Examples
>
>
> data("lizards", package = "brglm2")
> liz_fm <- cbind(grahami, opalinus) ~ height + diameter + light + time
> ## ML fit = MDYPL fit with `alpha = 1`
> liz_ml <- glm(liz_fm, family = binomial(), data = lizards,
+ method = "mdyplFit", alpha = 1)
Error in mdyplControl(epsilon = 1e-08, maxit = 25, trace = FALSE, tol = 1e-11, :
unused arguments (tol = 1e-11, wtol = 0)
Calls: glm -> eval -> eval -> mdyplFit -> mdyplFit -> do.call
Execution halted
Flavor: r-devel-windows-x86_64