bbfe956a3ab5304211265ec6bd553f61 *DESCRIPTION
3da05ded870b7a53efa9ab8633784722 *NAMESPACE
0479107580885f7befffd0a79baf0c79 *NEWS.md
0ee1912d1c2c1c500922fb6924f43272 *R/SNPAssayR-package.R
367508e2e45a296fb891ebb199213c0b *R/app.R
447f54eb059d6a33072b1214a0824f40 *R/arms.R
b799054735e790bbef84ab4f91a8b3aa *R/binding.R
e216cda24f482c366c4c83ed4ce039c8 *R/caps.R
9cb1e471e5aef71efd9b6decd74040a8 *R/dcaps.R
75b28210c18212c72b440803d0d68a97 *R/export.R
b423b3bdefbb0fde52a2df31615f1cdb *R/input.R
f458a3d80870f89e9ad8352bd32390f7 *R/primer.R
e30e635d636a80c9d8c618cc1726b201 *R/profiles.R
9f64951a41ccca9725ddb598a992cc13 *R/restriction.R
b2f32dd6506cf2b69bcaccff4945e509 *R/selection.R
52c05f076c22f888b88649e3efb48a1a *R/tetra.R
277e5237a3a9662196a4898a6300c3f2 *R/visual.R
80cffbf757ffcc3d40ef347d41cc2a80 *README.md
541df113fac7bdb1096c8193d839e405 *build/vignette.rds
8fa90128a53e76eb92c6d6e48dc73457 *inst/CITATION
db29a7cf639b83b7f952092718595444 *inst/COPYRIGHTS
046cdfc9b29e94c4abc6bc75e8e9fefb *inst/doc/SNPAssayR-workflows.R
a6a0d5a80917dc852c73c88ff6c37e18 *inst/doc/SNPAssayR-workflows.Rnw
d6123047051d49844c1c3ac48848e438 *inst/doc/SNPAssayR-workflows.pdf
3625b8f8d176a1d74cbb75a19026124c *inst/examples/tutorial_550bp.R
00388f20bb876f3a8cc2b11bcdd34d27 *inst/examples/tutorial_expected_primers.csv
2ce1fd6df4a9e532868486330662860e *inst/extdata/restriction_enzymes.csv
a1b4f56d392a24609683689a9b3843e6 *inst/extdata/tutorial_550bp.fasta
67e841da3b573d2975dfa050e65b9ccb *inst/methods/ARMS_ENGINE.md
5627b7fc720186aeda3856a549290e70 *inst/methods/CAPS_ENGINE.md
bfb5bbc4cd711e1e69fed889a4cda1f6 *inst/methods/DCAPS_ENGINE.md
1a3cb20c005694eb3028747b99b929d8 *inst/methods/ENZYME_DATA_RIGHTS.md
2ef707ea4b8e4679dbcd85f46624c145 *inst/methods/PRIMER_ENGINE.md
23d7a08dae99a38d4199e84f12377342 *inst/methods/PROFILE_ENGINE.md
9d887da8f9859066d311620a87078873 *inst/methods/SELECTION_EXPORT.md
6ea91b11b6c8d12c2e235c5f9d904c0a *inst/methods/SHINY_APP.md
74b8ea911735f3a6b00108dab5e9029e *inst/methods/TETRA_ENGINE.md
d239a7602942f3979a427cb193bb49fb *inst/methods/VISUAL_ENGINE.md
74c64c352b5e298496f720b0a7014cfc *inst/reference/README.md
3c38fa5725dcb316af7d3d4fcf5cc9ab *inst/reference/TEST_COVERAGE.md
2834d77c9f221e79c47f5139a1abaf64 *inst/reference/binding_preoptimization.rds
a3b83b82760997a4417a655c5b247579 *inst/reference/biopython_digests.csv
0fed1f420228115ccc8e5eb0029ded2d *inst/reference/biopython_tm.csv
d3a815e39415609edcfb4ed2e5506a9c *inst/reference/independent_binding.csv
d85805cd343614a30b8e5426d28e5029 *inst/reference/regenerate_references.py
e76d8f50a00319befd1bcbdf4ac7d3ed *inst/reference/tm_reference_values.csv
ba514567dbd67d024d91da10df74de7a *man/SNPAssayR-package.Rd
8238cec7cda170df10972f1925395b29 *man/assay_bundle.Rd
9253e76f4dfd126863fb4486a8c368eb *man/assay_preferences.Rd
8120fb3958086c51e8cad914b6da831d *man/assay_scene.Rd
b457450c11270788e609d4390e00f06a *man/assay_tables.Rd
635aae153e997eb943be013c2bd90f5e *man/band_scene.Rd
def708cea291e2ba56735a7e74d006f6 *man/compare_profiles.Rd
a1ee0959d554fe1b124c07c85c69f8ef *man/design_arms.Rd
7a6a1bbb63772f4f01dc75d98e659fe5 *man/design_caps.Rd
90b88f0a77731c7e177f8a8c32f0d14a *man/design_dcaps.Rd
4d80eb2b5f15fcf36c9e9191b32ae1cd *man/design_tetra_arms.Rd
1394f2da2431036cfc2fdc1cab15788a *man/digest_fragments.Rd
df5da52ea096c99e677ccdb5eedcce58 *man/draw_scene.Rd
4d4a54e28f59874cae4b0c7f383b2009 *man/evaluate_primer.Rd
f238087cf5caf3d8c2823f137f6ac744 *man/export_assay.Rd
7e81c0ef3936fe4afe36b4ad592fdef5 *man/export_scene.Rd
78264c9fe57307e91b3e1a2b10e4879e *man/find_binding_sites.Rd
c13d648fdeae69c4187dc532df1ac20e *man/find_hairpins.Rd
729897b3dbf6decf1dc357fcb37adc54 *man/fragment_profiles.Rd
4f3c557ad0d204501415e8ee5ed47b1c *man/group_bands.Rd
b6de2bab7032be40787ed90032457e4d *man/primer_interactions.Rd
2e8513e2f3e449cd77192ab3e6d6ea45 *man/rank_assays.Rd
57ddea5c4cc10e8277f2aa6e76255e65 *man/read_locus.Rd
58cc048c2ee7926c20306e54d9184244 *man/reconstruct_amplicon.Rd
70307569c4608ebb0bac4ea2ef35e4fa *man/replay_assay.Rd
6fc82ab7e15fe43d83eac7213ffc364b *man/restriction_enzymes.Rd
f8c3e052fe61f135d32909f5112a11cd *man/restriction_sites.Rd
f1fa2ce0bebc00e33c120e3e64889124 *man/reverse_complement.Rd
ab17b780e693e8d307dc31e052b29b93 *man/run_app.Rd
6af11c30131384fe569db538fafb68f8 *man/screen_primer_pair.Rd
df928fbd5161d9a9885f1200868ed47d *man/simulate_digest.Rd
9ab916d906e245e4fe694ac00db15bf9 *man/snpassay_app.Rd
79616b8f7973496d6755cfdd76523dec *man/validate_snp.Rd
f93246aa210c91119e79d703c52e6cf8 *tests/testthat.R
a33b85228255efdb8b04807853dd77ee *tests/testthat/test-app.R
8a1ffc8e11b59969e7f6bc5fdf49480d *tests/testthat/test-arms.R
2bf99a742f5780a1cd3eacba9d746bda *tests/testthat/test-binding.R
a94027383cd49b678ab0b90056d99a36 *tests/testthat/test-caps.R
ad20f0dd6f0124fa39a8913aeffc497f *tests/testthat/test-dcaps.R
10b998d8c547bd1e7e15e617b8091fd4 *tests/testthat/test-foundation.R
0da0d721aba3d79fb53dc5d153d89565 *tests/testthat/test-independent.R
9c23f6fb6f5bad1b9b97edfa99a2f7b3 *tests/testthat/test-input.R
8796153d4361fb7e4e5bd771b12cb39a *tests/testthat/test-primer.R
953efd8044e15d4c1e23e2a4d88a879e *tests/testthat/test-profiles.R
f07f9c04c589a339d584c9c0dd292571 *tests/testthat/test-release-contracts.R
3125af7408cff7213252e6d3ef37dc48 *tests/testthat/test-restriction.R
1a6eac39c3f66b304cc89417788bb757 *tests/testthat/test-selection.R
6d631f46258e07411d6f48c50d9b89a5 *tests/testthat/test-tetra.R
14c19eaa4f27255cca83aefec049652f *tests/testthat/test-tutorial-assets.R
27d86d5c2d11a33dd03b912e84429c2f *tests/testthat/test-visual.R
a6a0d5a80917dc852c73c88ff6c37e18 *vignettes/SNPAssayR-workflows.Rnw
