Pipeline for Dose-Response Curve Analysis


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Documentation for package ‘toxdrc’ version 1.0.1

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averageresponse Average response variable
blankcorrect Blank correct response variable
cellglow Example toxicity test data with multiple experimental groups.
checktoxicity Check for an effect
config_runtoxdrc Configuration functions for the runtoxdrc pipeline
flagCV Check for groups with high CV
getECx Get point estimates from model
getmetadata Generate metadata from a dataframe
modelcomp Compare model fits and select best model
normalizeresponse Normalize response variable
pctl Check for positive control effect
removeoutliers Remove outliers iteratively using Grubbs' test.
runtoxdrc Point estmation pipeline
toxdrc_modelling Modelling configuration for for the runtoxdrc pipeline.
toxdrc_normalization Set normalization configuration for the runtoxdrc pipeline.
toxdrc_output #' Output configuration for for the runtoxdrc pipeline.
toxdrc_qc Set quality control options for the runtoxdrc pipeline.
toxdrc_toxicity Toxicity configuration for for the runtoxdrc pipeline.
toxresult Example toxicity test data from a single experimental subset.