Extract Glycan Motifs from Glycan Structures


[Up] [Top]

Documentation for package ‘glymotif’ version 1.0.0

Help Pages

.g_count_motif Low-Level Motif Matching on Graphs
.g_have_motif Low-Level Motif Matching on Graphs
.g_match_motif Low-Level Motif Matching on Graphs
branch_motifs Branch Motifs Specification
count_motif Count How Many Times Glycans have the Given Motif(s)
count_motifs Count How Many Times Glycans have the Given Motif(s)
db_motifs Get All Motifs from the Database
db_motif_info Get Database Motif Information
dot-g_motif Low-Level Motif Matching on Graphs
dynamic_motifs Dynamic Motifs Specification
extract_branch_motif Extract Branch Motifs
extract_motif Extract All Substructures (Motifs)
get_motif_alignment Get the Structures or Alignments of Known Motifs
get_motif_structure Get the Structures or Alignments of Known Motifs
have_motif Check if the Glycans have the Given Motif(s)
have_motifs Check if the Glycans have the Given Motif(s)
is_known_motif Check if a Motif is Known
match_motif Match Motif(s) in Glycans
match_motifs Match Motif(s) in Glycans
view_motif View motif matches on a glycan