Dendrogram Seriation: Ordering for Visualisation

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Documentation for package ‘DendSer’ version 1.0.3

• DESCRIPTION file.
• User guides, package vignettes and other documentation.
• Code demos. Use demo() to run them.
• Package NEWS.

Help Pages

cost	Cost functions for DendSer Each of these functions evaluates the cost of an ordering.
costARc	Cost functions for DendSer Each of these functions evaluates the cost of an ordering.
costBAR	Cost functions for DendSer Each of these functions evaluates the cost of an ordering.
costED	Cost functions for DendSer Each of these functions evaluates the cost of an ordering.
costLPL	Cost functions for DendSer Each of these functions evaluates the cost of an ordering.
costLS	Cost functions for DendSer Each of these functions evaluates the cost of an ordering.
costPL	Cost functions for DendSer Each of these functions evaluates the cost of an ordering.
crit2cost	Cost function from seriation criterion
DendSer	Implements dendrogram seriation
dser	Implements dendrogram seriation. Interface to DendSer.
dser.data.frame	Implements dendrogram seriation. Interface to DendSer.
dser.dist	Implements dendrogram seriation. Interface to DendSer.
dser.hclust	Implements dendrogram seriation. Interface to DendSer.
dser.matrix	Implements dendrogram seriation. Interface to DendSer.
plotAsColor	Function that plots a matrix as a color image