# Generated by roxygen2: do not edit by hand

S3method("$",tcga_table)
S3method("$<-",tcga_table)
S3method("[",cellmarker_match)
S3method("[[",tcga_table)
S3method("[[<-",tcga_table)
S3method(print,tcga_table)
export(Artist)
export(available_ele)
export(available_tissue_class)
export(available_tissue_type)
export(check_marker)
export(dgeList)
export(dge_list)
export(dprocess_dgeList)
export(finsert)
export(get_attr)
export(get_marker)
export(groupStat)
export(groupStatI)
export(group_stat)
export(group_stat_i)
export(limmaFit)
export(limma_fit)
export(list2dt)
export(list2graph)
export(matchCellMarker2)
export(match_ref)
export(plotEnrichment2)
export(plotGSEA)
export(plotMarkerDistribution)
export(plotORA)
export(plotPossibleCell)
export(plotRank)
export(plotSeuratDot)
export(plotVolcano)
export(plot_enrichment)
export(plot_gsea)
export(plot_marker_distribution)
export(plot_ora)
export(plot_possible_cell)
export(plot_rank)
export(plot_seurat_dot)
export(plot_volcano)
export(prepare_geo)
export(prepare_tcga)
export(process_dge_list)
export(setSavedir)
export(set_colnames)
export(set_rownames)
export(set_savedir)
export(setcolnames)
export(setrownames)
export(split_matrix)
export(suggest_best_match)
export(theme_publication)
export(tuneParameters)
export(tune_parameters)
export(uniprot_id_map)
export(workIn)
export(work_in)
import(data.table)
import(ggplot2)
importFrom(R6,R6Class)
importFrom(checkmate,assert_character)
importFrom(checkmate,assert_data_frame)
importFrom(checkmate,assert_names)
importFrom(checkmate,assert_number)
importFrom(checkmate,assert_string)
importFrom(checkmate,assert_subset)
importFrom(grDevices,rainbow)
importFrom(graphics,boxplot)
importFrom(graphics,lines)
importFrom(graphics,par)
importFrom(graphics,plot)
importFrom(graphics,title)
importFrom(stats,density)
importFrom(stats,formula)
importFrom(stats,model.matrix)
importFrom(stats,na.omit)
importFrom(stats,reorder)
importFrom(stats,setNames)
importFrom(stats,t.test)
importFrom(stats,wilcox.test)
importFrom(utils,adist)
importFrom(utils,combn)
importFrom(utils,head)
