# Bayesian Transition Analysis with Markov Chain Monte Carlo

## Documentation for package ‘baytaAAR’ version 1.0.3

- DESCRIPTION file
- User guides, package vignettes and other documentation
- Package NEWS
- Package README

## Help Pages

age.comp.plot | Plots of quality measures of age estimation
age.comp.summary | Quality measures of age estimation
age.estim.summary | Summary of age estimates
bay.ta | Bayesian Transition Analysis with JAGS or NIMBLE
corr.mat.mean | Extract correlation matrix from Cholesky factor
diagnostic.summary | Diagnostic summary of MCMC samples
diagnostics.max.min | Maximum and minimum diagnostic values
prob.cat | Summed or mean probability densities per category
sequential.binom.test | Sequential cumulative binomial test
sorsum_as | Sorsum: Example dataset
spitalfields | Spitalfields: Example dataset
threshold.chains | Compute thresholds for chains
threshold.matrix | Extract thresholds