Insect Ecology Data Analysis Toolkit

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Documentation for package ‘insectecol’ version 1.1.1

Help Pages

check_path_type Check the Type of an Input Path
default_stage_names Default Developmental Stage Names
emergence_analyze Predict the Emergence Period from a Stage-Structure Survey
emergence_calc Core Emergence-Period Calculation (Stage-Grading Method)
emergence_export Save Emergence-Period Projection Results
emergence_export_plot Export the Emergence-Period Plot as PNG
emergence_read Read a Stage-Structure Survey from a File or a Folder
gdd_analyze Analyse Temperature-Dependent Development (Main Function)
gdd_calc Compute Effective Accumulated Temperature and Developmental Parameters (Linear or Nonlinear Models)
gdd_check Check Developmental Data (Long Format) Before Fitting
gdd_compare Compare Temperature-Development Models
gdd_daily Daily Accumulation of Degree-Days (Field Application)
gdd_export Save Degree-Day Analysis Results
gdd_export_plot Export the Degree-Day Plot as PNG
gdd_plot Plot Developmental Rate vs Temperature with the Fitted Model
gdd_predict Predict Developmental Duration at Given Temperatures
gdd_read Read Insect Developmental Data from a Folder or a File
get_stage_names Extract the Developmental Stage Names from the Header
lc50_analyze Analyse Bioassay Data for LC Estimation (Main Function)
lc50_calculate Batch Calculation of LC Values
lc50_export Export LC Results to 'Excel'
lc50_export_auto Save the LC Results of Every Data File (One xlsx per csv)
lc50_export_plot Save LC50 Plots
lc50_export_plot_auto Save the LC Figure of Every Data File (One image per csv)
lc50_plot LC50 Regression Plots
lc50_read Read Bioassay Data for LC Estimation
lifeTable_analyze Analyse a Life Table from User-Supplied Columns (Main Function)
lifeTable_bootstrap Bootstrap Standard Errors of Life Table Parameters
lifeTable_boot_test Paired Bootstrap Test Between Two Life Tables
lifeTable_build Build a Life Table Object from User-Supplied Columns
lifeTable_calculate Batch Analysis of Life Table Data
lifeTable_calculate_all Calculate All Parameters of One Life Table
lifeTable_check Validate a Life Table Data Set
lifeTable_export Save the Results of One Life Table Analysis
lifeTable_plot Age-Stage Survival Rate Curves
lifeTable_read Read an Age-Stage, Two-Sex Life Table from a csv File
plot.emergence Plot an Emergence-Period Projection
predict.emergence Quantiles of an Emergence-Period Projection
print.emergence Print an Emergence-Period Projection
summary.emergence Summarise an Emergence-Period Projection