Read, Write, Validate, and Analyze Real-Time PCR Data in the
'RDML' Format
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Documentation for package ‘RDML7’ version 1.0.2
Help Pages
| annotationType | annotationType S7 class |
| AsDendrogram | Legacy API compatibility wrappers |
| asDendrogram | Represent RDML structure as a dendrogram |
| AsTable | Legacy API compatibility wrappers |
| asTable | Build a metadata table from an RDML object |
| asXML | Serialize an RDML object to XML |
| buildRDMLFromFData | Create an RDML object from fluorescence and metadata tables |
| buildRDMLImport | Build rdmlType from canonical importer data |
| cdnaSynthesisMethodType | cdnaSynthesisMethodType S7 class |
| commercialAssayType | commercialAssayType S7 class |
| cqDetectionMethodType | cqDetectionMethodType S7 enumeration |
| dataCollectionSoftwareType | dataCollectionSoftwareType S7 class |
| dataType | dataType S7 class |
| detectRDMLFormat | Detect the format handler selected for a path |
| documentationType | documentationType S7 class |
| dpAmpCurveType | dpAmpCurveType S7 class |
| dpMeltingCurveType | dpMeltingCurveType S7 class |
| dyeChemistryType | dyeChemistryType S7 enumeration |
| dyeType | dyeType S7 class |
| editRDML | Launch the RDML editing interface |
| experimenterType | experimenterType S7 class |
| experimentType | experimentType S7 class |
| GetFData | Legacy API compatibility wrappers |
| getFData | Extract fluorescence data |
| gradientType | gradientType S7 class |
| idReferenceType | RDML identifier reference |
| idType | RDML identifier |
| isValidRDML | Test whether an RDML object has semantic errors |
| labelFormatType | labelFormatType S7 enumeration |
| legacy-api | Legacy API compatibility wrappers |
| lidOpenType | lidOpenType S7 class |
| listRDMLFormats | List registered RDML file formats |
| loadRDMLModule | Load file-format handlers from an R module |
| loopType | loopType S7 class |
| measureType | measureType S7 enumeration |
| MergeRDMLs | Legacy API compatibility wrappers |
| mergeRDMLs | Merge multiple RDML objects |
| metadata-schema-types | Metadata schema types |
| newRDMLImportData | Create canonical importer data |
| newRDMLImportSeries | Create an importer fluorescence-series object |
| newRDMLLossRecord | Create a structured lossy-conversion record |
| nucleotideType | nucleotideType S7 enumeration |
| oligoType | oligoType S7 class |
| partitionDataType | partitionDataType S7 class |
| partitionsType | partitionsType S7 class |
| pauseType | pauseType S7 class |
| pcrFormatType | pcrFormatType S7 class |
| primingMethodType | primingMethodType S7 enumeration |
| quantityType | quantityType S7 class |
| quantityUnitType | quantityUnitType S7 enumeration |
| rdml-experimental-types | Experimental data and run schema types |
| rdml-sample-target-types | Sample and target schema types |
| rdml-thermal-types | Thermal-cycling schema types |
| rdmlEdit | Legacy API compatibility wrappers |
| rdmlIdType | rdmlIdType S7 class |
| rdmlImportData | Parsed importer data before construction of rdmlType |
| rdmlImportSeries | One fluorescence-series group for the importer API |
| rdmlKeyedList | Keyed list view used by RDML S7 objects |
| rdmlType | rdmlType S7 class |
| reactPosition | Return the canonical position of an RDML reaction |
| reactType | reactType S7 class |
| readRDML | Read qPCR data into an RDML object |
| registerRDMLFormat | Register a file-format reader and/or writer |
| runType | runType S7 class |
| sampleTargetType | sampleTargetType S7 class |
| sampleType | sampleType S7 class |
| sampleTypeType | sampleTypeType S7 enumeration |
| sequencesType | sequencesType S7 class |
| SetFData | Legacy API compatibility wrappers |
| setFData | Add or replace fluorescence data |
| stepType | stepType S7 class |
| summary | Summarize an RDML object |
| summary-method | Summarize an RDML object |
| targetType | targetType S7 class |
| targetTypeType | targetTypeType S7 enumeration |
| temperatureBaseType | temperatureBaseType S7 class |
| temperatureType | temperatureType S7 class |
| templateQuantityType | templateQuantityType S7 class |
| thermalCyclingConditionsType | thermalCyclingConditionsType S7 class |
| unregisterRDMLFormat | Unregister a file format |
| validateRDML | Semantically validate an RDML object |
| writeRDML | Write an RDML object through the file-format registry |
| xRefType | xRefType S7 class |