Statistical Analysis of Induced Mutagenesis Experiments in Crop Plants

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Documentation for package ‘BKMutate’ version 0.1.0

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BKMutate-package BKMutate: Statistical Analysis of Induced Mutagenesis Experiments
BKMutate BKMutate: Statistical Analysis of Induced Mutagenesis Experiments
bm_compare Formal comparison of mutagens
bm_data Load a bundled BKMutate example dataset
bm_dose Dose-response analysis: LD50 and GR50 with Fieller confidence intervals
bm_effect Mutagenic effectiveness and efficiency with confidence intervals
bm_m2 Generalised linear models for M2 mutant counts
bm_palette BKMutate colour palettes
bm_plot Draw the signature figure for a BKMutate result
bm_spectrum Chlorophyll mutation spectrum analysis
scale_color_bm Discrete BKMutate colour and fill scales
scale_colour_bm Discrete BKMutate colour and fill scales
scale_fill_bm Discrete BKMutate colour and fill scales
theme_bm A clean ggplot2 theme for BKMutate figures