# Analytical Tool for Aquatic Respirometry

## Documentation for package ‘FishResp’ version 1.1.1

- DESCRIPTION file.

## Help Pages

AMR | Active Metabolic Rate: Final Data
AMR.clean | Active Metabolic Rate: Corrected Raw Data
AMR.raw | Active Metabolic Rate: Raw Data
AMR.slope | Active Metabolic Rate: Extracted Slope(s)
calculate.MR | Calculation of Metabolic Rate
convert.respirometry | Convert Raw Respirometry Data (respirometry)
convert.rMR | Convert Raw Respirometry Data (rMR)
correct.meas | Correction of Metabolic Rate Measurements
export.MR | Export Metabolic Rate
extract.slope | Extraction of Slope(s)
FishResp | FishResp: Analytical Tool for Aquatic Respirometry
import.meas | Import Raw Data of Metabolic Rate Measurements
import.test | Import Background Respiration Data
info | Info about Individuals and Chambers
input.info | Input the Information about Individuals and Chambers
post | Post Raw Data
pre | Pre Raw Data
prepare.data | Prepare Raw Respirometry Data
presens.aquaresp | Convert Respirometry Data from PreSens and AquaResp Software to the FishResp Format
pyroscience.aquaresp | Convert Respirometry Data from PyroScience and AquaResp Software to the FishResp Format
pyroscience.pumpresp | Convert Respirometry Data from PyroScience and the pump controller PumpResp to the FishResp Format
QC.activity | Quality Control of Animal Activity
QC.meas | Quality Control of Raw Data
QC.slope | Quality Control of Slope(s)
results | Results of Analysis: SMR, AMR and MS
rm.data | Remove Poor Quality Data
SMR | Standard Metabolic Rate: Final Data
SMR.clean | Standard Metabolic Rate: Corrected Raw Data
SMR.raw | Standard Metabolic Rate: Raw Data
SMR.slope | Standard Metabolic Rate: Extracted Slope(s)